• Skip to primary navigation
  • Skip to main content
  • Skip to primary sidebar
  • Skip to footer
Two Purple Figs
  • Home
  • Recipes
        • By Course
          • Appetizer Recipes
          • Main Dishes
            • Chicken
            • Beef
            • Lamb
            • Pasta
            • Pizza
            • Sandwiches
            • Seafood
          • Side Dishes
          • Soups
          • Salads
          • Breakfast Brunch Recipes
          • Desserts
            • Cakes
            • Cheesecakes
            • Cookies
            • Bars & Brownies
            • Muffins
            • Pies
          • Drinks & Smoothies
        • By Method
          • Videos
          • Quick & Easy
          • Air Fryer Recipes
          • Crock Pot Recipes
          • Instant Pot
          • Finger Food
          • Bread Recipes
          • Dips
        • By LifeStyle
          • Gluten Free
          • Vegetarian
          • Vegan
        • By Cuisine
          • American Recipes
          • Asian Recipes
          • Mediterranean Recipes
          • Mexican Recipes
        • By Occasion
          • Easter
          • Holidays
          • Parties
          • Potluck
          • Tailgate
        • All Recipes
  • Recipe Videos
  • About Me
  • Work with Me
  • Newsletter
You are here: Home / Recipes / Desserts / Muffins / Apple Muffins

Apple Muffins

October 5, 2018 by Mahy, Updated September 19, 2023 26 Comments

Jump to Recipe Jump to Video Print Recipe

These Apple Muffins have the perfect amount of sweetness, little fruity pockets of apples, and a sweet almond crunch topping! Start your morning right with this wholesome apple muffin! I’m sitting here smelling the sweet scent of these muffins baking and it’s a beautiful thing.

Whole Wheat Apple Cinnamon Muffins with Almond Crumb Topping arranged on a wooden tabletop with an apple in the background

These  Apple Cinnamon Muffins are hearty, tender, light, and perfectly balanced. Not too sweet, packed with apples, spiced with cinnamon, and topped with an oatmeal almond cinnamon crunch.

The whole wheat flour adds extra fiber and a nutty taste. These healthy apple muffins are a guilt-free version of the favorite coffee shop apple cinnamon muffin we all know and love.  

Apple season for us means Apple Crisp Recipe, Homemade Apple Cider, Apple Crumble, Easy Candy Apples, Baked Apples, Swiss Apple Tart Recipe, Apple Pie Stuffed Apples, Baked Apple Fries With Raspberry Sauce, and those melt in your mouth apple muffins!

 

 

WHY APPLE CINNAMON MUFFINS

A good apple Muffin recipe is one of those essential breakfast muffin recipes to have on hand. For starters, it has apples and cinnamon as main ingredients – hello comfort food.

Also, it’s a super easy muffin batter, meaning you need one bowl and a whisk to get it ready. Simply whisk the batter while the oven preheats and after only 15 minutes of baking time there will be Muffins ready to be devoured!

As a bonus, these healthy Apple Cinnamon Muffins are not too sweet so you don’t feel heavy or guilty. They are made with whole wheat flour lending them a nice nutty flavor and a good hearty wholesome feeling.

Let’s not forget the oatmeal almond crunch topping which is like the icing on the muffin!

HOW TO MAKE APPLE MUFFINS

All baking fears aside, muffins shouldn’t really be considered baking. They’re straightforward, forgiving, and really really easy to make. If anyone tells you otherwise, I’d like to know who!

Whole Wheat Apple Cinnamon Muffins in a muffin tin with one muffin missing

Ingredients for Healthy Apple Muffins

Whole Wheat Flour. Do it. You will be shocked out how lovely a whole wheat muffin turns out!

Baking Soda.

Salt.

Egg.

Apples. Cored and grated or shredded.

Yogurt. Use plain yogurt or buttermilk. Either will work.

Light Brown Sugar.

Oil.

Cinnamon.

Ingredients: Flour, brown sugar, baking soda, salt, apples, cinnamon, egg, oil.

Ingredients for the Crunch Topping

Oats. Any kind will work.

Cinnamon.

Sugar.

Almonds. Slivered, sliced, or chopped will work.

Ingredients for crunch topping: oats, cinnamon, almonds, sugar.

Preheat your oven to 375 degrees F and grease or line your muffin pan with paper liners. In a small bowl, whisk the flour, baking soda, and salt.

Take another large bowl and add the egg, yogurt, brown sugar, oil, and cinnamon and whisk them together well. Many muffin recipes call for granulated sugar but I find that brown sugar results in a much better texture and flavor.

Now, add in the flour mixture and apples and use a spatula to mix everything together until it’s just blended—but still has some visible lumps of batter.

The crunchy topping is very much optional, it does add a delicate crunch and an extra flavor from the oats and almonds.

I added cinnamon to the crunch topping because I already used cinnamon in the whole wheat apple muffins and wanted to spike the flavor even more. Any type of nuts will work here, and any spice. Either way, all you need is a big bowl and a whisk to whip up these wonderful whole wheat apple muffins and enjoy !:) To make the crunch topping simply mix the four ingredients together.

half a Whole Wheat Apple Cinnamon Muffin leaning against a red apple with more muffins in the background

I divided the Apple Cinnamon Muffin batter up in a prepared muffin tin, but you could also use a mini muffin pan or a donut pan. After filling the pan spots with batter sprinkle a generous 1/2 teaspoon of crunchy topping on top of each muffin.

Bake the apple muffins for 15-18 minutes until a toothpick comes out clean when inserted in the middle of the muffin.

close-up of Whole Wheat Apple Cinnamon Muffins in a muffin tin

TOPPINGS FOR APPLE MUFFINS

While our oatmeal almond cinnamon crunch topping is the perfect addition to these muffins, you can choose from a variety of toppings if you would prefer one of these.

  • raisins
  • crushed walnuts or pecans or almonds
  • streusel
  • Rolled Oats
  • powdered sugar (added after baking)
  • Glaze made with apple juice and powdered sugar

APPLE CINNAMON MUFFIN TIPS

  • Do not overmix the batter or your Apple Cinnamon Muffins will be tough.
  • It’s best if the muffins rest 10 minutes before baking because of the whole wheat flour.
  • I sometimes add ginger to the muffin batter, sometimes apple pie spice, and sometimes skip the cinnamon and all other spices, and just add vanilla.
Gorgeous baked healthy apple muffins.

STORING LEFTOVER APPLE CINNAMON MUFFINS

Make sure the muffins are room temperature before storing leftovers. Otherwise, they will become soggy. These Apple Cinnamon Muffins stay fresh for at least 3 days when stored in an airtight container. You can also wrap them in cling film individually.

If you’d like to get a headstart on quick and easy breakfasts for the school year and busy weekdays, you can wrap each muffin individually, freeze them, and then place the frozen muffins in a freezer-quality baggy for up to three months. Thaw and enjoy as needed! About thirty seconds in the microwave (give or take a few depending on your machine) will thaw muffins perfectly.

MORE GREAT MUFFIN RECIPES

Raspberry Muffins

Ultimate Blueberry Raisin Bran Muffins

Blueberry Muffins With Crumb Topping

Banana Bread Muffins

Cinnamon Rolls Muffins

Orange Chai Spice Date Muffins

Ginger Clementine Lemon Poppy Seed Muffins

Best Cornbread Muffins

Whole Wheat Apple Cinnamon Muffins with Almond Crumb Topping arranged on a wooden tabletop with an apple in the background
4.46 from 22 votes
Print

Whole Wheat Apple Cinnamon Muffins

These healthy Whole Wheat Apple Cinnamon Muffins have the perfect amount of sweetness, little fruity pockets of apples, and a sweet almond crunch topping! Start your morning right with this wholesome breakfast muffin! 

Course Breakfast, brunch, Snack
Cuisine American
Keyword almond crunch muffins with apples, apple cinnamon muffins, whole wheat muffins with apples
Prep Time 10 minutes
Cook Time 17 minutes
Total Time 27 minutes
Servings 12
Calories 186 kcal
Author Mahy

Ingredients

For the batter:

  • 1 1/2 cups whole wheat flour
  • 1 teaspoon baking soda
  • 1 pinch salt
  • 1 egg
  • 2/3 cup light brown sugar
  • 3/4 cup buttermilk or plain yogurt
  • 1/4 cup oil
  • 2 apples cored and grated or shredded
  • 1 teaspoon cinnamon

For the topping:

  • 2 tablespoons oats (any type)
  • 1 tablespoon sugar
  • 1/4 teaspoon cinnamon
  • 2 tablespoon almonds slivered, sliced or chopped

Instructions

For the muffins:

  1. Preheat your oven to 375 degrees F.
  2. Grease or line your muffin pan with paper liners.
  3. In a small bowl whisk in the flour, baking soda and salt. Set that bowl aside.
  4. In a large bowl, add the egg, yogurt, brown sugar, oil and cinnamon and whisk them well. then add in the flour mixture and apples. 

  5. Use a spatula to mix everything together until it’s blended—but still has some visible lumps of batter. Do not over mix the batter.

For the crunch topping:

  1. Mix all the ingredients for the topping in a small bowl.

To assemble:

  1. Divide the batter among the muffin pan and sprinkle a generous 1/2 teaspoon of crunchy topping on top of each muffin. It’s best if the muffins rest 10 minutes before baking to allow for the whole wheat flour to soak up some moisture.

  2. Bake the muffins for 15-18 minutes until a toothpick comes out clean when inserted in the middle of the muffin.

Recipe Video

Recipe Notes

  • Do not overmix the batter or your Apple Cinnamon Muffins will be tough.
  • It’s best if the muffins rest 10 minutes before baking because of the whole wheat flour
  • These Apple Cinnamon Muffins stay fresh for at least 3 days when stored in an airtight container. You can also wrap them in cling film individually.
  • I sometimes add ginger to the muffin batter, sometimes apple pie spice, and sometimes skip the cinnamon and all other spices, and just add vanilla.
Nutrition Facts
Whole Wheat Apple Cinnamon Muffins
Amount Per Serving (1 muffin)
Calories 186 Calories from Fat 54
% Daily Value*
Fat 6g9%
Cholesterol 15mg5%
Sodium 119mg5%
Potassium 143mg4%
Carbohydrates 29g10%
Fiber 2g8%
Sugar 16g18%
Protein 3g6%
Vitamin A 60IU1%
Vitamin C 1.4mg2%
Calcium 42mg4%
Iron 0.8mg4%
* Percent Daily Values are based on a 2000 calorie diet.

Related Posts

stacked up raspberry muffins over one another with fresh rasberries around them and some lemons in the background on a white boardRaspberry Muffins Apple crumble on a baking dish topped with vanilla ice cream and a spoon insideApple Crumble A tray with two cups of homemade apple cider and a large glass jar of apple cider to serve extras, surrounded by flowers, and garnished with cinnamon sticks, orange slices, apple slicesHomemade Apple Cider A hand scooping apple crisp showing the4 cooked soft apples and the crunchy oatmeal crumb on topApple Crisp Recipe
819 shares
  • Share2
  • Yummly
  • Email
  • WhatsApp

Filed Under: Breakfast Brunch Recipes, Desserts, Holidays, Muffins, Parties, Recipes Tagged With: almonds, apple cinnamon, apple muffins, baking, cinnamon apple, crunch topping, muffins, whole wheat apple muffins, whole wheat muffins

Previous Post: « Spicy Mango Chicken Wings
Next Post: Baklava Yogurt Parfait with Homemade Baklava Crumbles »

Reader Interactions

Comments

  1. Lucy Mac

    December 6, 2019 at 11:05 am

    5 stars
    This is absolutely the best whole wheat flour muffin recipe I have ever baked. I had three small apples that had been on my counter for awhile, and these muffins were just delicious, and not too sweet. Usually, muffins are a bit dense when using whole wheat flour (I used white whole wheat flour), but these were fluffy, had a wonderful texture, and the topping was divine. Several years ago, I read to preheat oven to 500 degrees F before baking muffins. Then, after placing the tin in the oven, immediately turn down the temperature to what is shown on the recipe. This causes the muffins to rise high very quickly, and it does not affect the time required for baking. Thank you for sharing such a tasty and healthy recipe!

    Reply
    • Mahy

      December 9, 2019 at 10:04 pm

      Lucy you made my day!!! Thank YOU! I really love these muffins and I’m so happy you liked them as much 🙂

      Reply
  2. Mona

    October 15, 2018 at 11:41 am

    So healthy and delicious

    Reply
    • Mahy

      October 23, 2018 at 10:36 am

      Thanks so much!!!

      Reply
  3. Natalie

    October 8, 2018 at 5:49 am

    5 stars
    Apples are just delicious this time of year. This muffins fit perfectly into Fall story. They look so moist and so flavorful. Can’t wait to give these muffins a try.

    Reply
    • Mahy

      October 9, 2018 at 6:57 pm

      Enjoy Natalie

      Reply
  4. Tammy

    October 7, 2018 at 11:29 pm

    5 stars
    Ahh your muffins look glorious!! I wish I could reach into my screen and grab one! I’ve craving these right now 😀

    Reply
    • Mahy

      October 9, 2018 at 6:58 pm

      hahah Tammy Thanks!!

      Reply
  5. Dan Zehr

    October 7, 2018 at 3:59 pm

    5 stars
    Oh yum! My whole family would go crazy for these!
    Wow and wow, this is so delicious and it makes my mouth watering

    Reply
    • Mahy

      October 9, 2018 at 6:58 pm

      Thanks Dan

      Reply
  6. Marisa Franca

    October 7, 2018 at 3:39 pm

    5 stars
    The apple cinnamon muffins looks fantastic — and I bet they taste even better. The muffins would make wonderful treats for after school or even in the lunch box. Frankly, I’d love to have one right now with my coffee.

    Reply
    • Mahy

      October 9, 2018 at 6:58 pm

      They’re super good Marisa!

      Reply
  7. Veena Azmanov

    October 6, 2018 at 4:51 pm

    5 stars
    Love apple muffins but never made them in whole wheat. This sounds like a great recipe. Next time I make apple muffins I must try making whole wheat.

    Reply
    • Mahy

      October 9, 2018 at 7:00 pm

      You’ll love them Veena!

      Reply
  8. Vanessa Price

    October 6, 2018 at 1:48 pm

    5 stars
    Whole wheat baked goods are my jam. These look wonderful! I’ll be trying them at home soon.

    Reply
    • Mahy

      October 9, 2018 at 7:00 pm

      Hope you enjoy them!

      Reply
  9. Gloria

    October 6, 2018 at 9:27 am

    5 stars
    These would be great for an after-school snack for my grandkids. I am always on the lookout for healthy treats. Gramma needs to bake a batch of these up soon.

    Reply
    • Mahy

      October 9, 2018 at 7:01 pm

      enjoy Gloria!!!

      Reply
  10. Pavani

    October 5, 2018 at 2:41 pm

    5 stars
    Wow, those muffins look so hearty and absolutely delicious. These are perfect for this time of the year — all the yummy flavors of fall in one delicious muffin.

    Reply
    • Mahy

      October 9, 2018 at 7:01 pm

      So true Pavani

      Reply
  11. Claudia Lamascolo

    October 5, 2018 at 1:48 pm

    These are the perfect example of how you can eat healthy without the guilt these look delicious

    Reply
    • Mahy

      October 9, 2018 at 7:02 pm

      oh yes Claudia!

      Reply
  12. Karyl Henry

    October 5, 2018 at 12:29 pm

    5 stars
    These look delicious and healthy, perfect for an afternoon snack! And I love that you topped them with slivered almonds too

    Reply
    • Mahy

      October 9, 2018 at 7:02 pm

      Thanks Karyl

      Reply
  13. 40A.

    August 19, 2018 at 2:50 pm

    5 stars
    These look perfect and I love the crumb topping! The perfect snack on a rainy fall morning!

    Reply
    • Mahy

      August 29, 2018 at 10:11 am

      So true!

      Reply
4.46 from 22 votes (11 ratings without comment)

Leave a Reply Cancel reply

Your email address will not be published. Required fields are marked *

Recipe Rating




Primary Sidebar

Search for a recipe

Mahy PicHi, I'm Mahy, a recipe developer, food stylist, culinary instructor, photographer, wife and busy mom! Welcome to my blog!...Read More

Never Miss a Post!

subscribe and receive fresh recipes to your inbox

Share the Love

As Featured On

Search by category

Footer

Footer logo

About

About Mahy

Sign up to Newsletter

Work with Me

Contact

Recipes

By Life Style

By Course

By Method

By Cuisine

By Occasion

All Recipes

Copyright © 2025 · Privacy Policy

All images and content are copyright protected. Please contact me if you would like to use any images . If you want to republish any of my recipes, please link back to my website and the recipe post.

»
«

Rate This Recipe

Your vote:




A rating is required
A name is required
An email is required

Recipe Ratings without Comment

Something went wrong. Please try again.